Schedule

---

This course is given at Navet (E10) at BMC. Click the heading of a topic to see the lecture slides or lab instructions.

Leading the tutorials will be Moritz Buck Assisting in the tutorials will be : Mahesh Binzer-Panchal, Sari Peura, Lucile Soler

Monday 20th

Room: E10:1308/1309 (BMC, entrance C11)

• Monday 9-9.30: Introduction to metagenomics (lecture, Moritz Buck)
• Monday 9.30-12: general NGS data types/UPPMAX (tutorial)
• Monday 12-12.45: Lunch
• Monday 12.45-13.15: Amplicon (lecture, Sari Peura)
• Monday 13.15-17: Amplicon (tutorial)

Tuesday 21th

Room: E10:1308/1309 (BMC, entrance C11)

• Tuesday: 9-12 Amplicon, Shotgun — read-based analysis (tutorial)
• Tuesday 12-12.45: Lunch
• Tuesday 12.45-13.15: Assembly (lecture, Moritz Buck)

• Tuesday 13.15-17: Assembly and mapping (tutorial)

• Tuesday 18-20: Course dinner Messob (Sturegatan 4A, Uppsala)

Wednesday 22th

Room: E10:1308/1309 (BMC, entrance C11)

• Wednesday 9-11.30: Assembly (tutorial)
• Wednesday 11.30-12: Binning/Annotation (lecture, Anders Andersson)
• Wednesday 12-12.45: Lunch
• Wednesday 12.45-17: Binning/Annotation (tutorial)