Introduction to Bioinformatics Using NGS Data

Held in Linköping May 21 - 25, 2018.

Pre-course material
Schedule

Helpful Things

Linux cheat sheet
Bash cheat sheet level1
Bash cheat sheet level2
Bash cheat sheet level3
UPPMAX cheat sheet
Mac keyboard layout

External Resources

IGV (Integrative Genomics Viewer) Home
Samtools Home
BWA Home
GATK Home
SeqAnswers - Next-generation sequencing forum
Biosupport.se - Sweden centered bioinformatics Q&A
Trinity
Cufflinks
Allpaths-lg