Schedule

####This course is given at Navet (E10) at BMC. Click the heading of a topic to see the lecture slides or lab instructions.

Tuesday 26th

Room: E10:1309
09.00-9.15 Introduction
09.15-10.00 Lecture: Understanding Annotation (Henrik Lantz)
10.00-10.20 Coffee break
10.20-12.00 Practical 1: Preparing evidence data for annotation (Henrik Lantz, Jacques Dainat, Martin Norling, Mahesh Panchal, Lucile Soler)
12.00-12.40 Lunch
12.40-13.40 Lecture: Structural annotation programs and pipelines (Jacques Dainat)
13.40-17.00 Practical 2: Structural annotation of eukaryote genomes (incl. coffee break) (Henrik Lantz, Jacques Dainat, Martin Norling, Mahesh Panchal, Lucile Soler)

18.00 Course dinner at Koh Phangan restaurant

Wednesday 27th

Room: E10:1309
09.00-10.00 Lecture: Functional annotation (Jacques Dainat)
10.00-10.20 Coffee break
10.20-12.00 Practical 3: Manual curation (Henrik Lantz, Jacques Dainat, Martin Norling, Mahesh Panchal, Lucile Soler)
12.00-12.40 Lunch
12.40-17.00 Practical 4: Functional annotation and annotation analysis contd. (incl. coffee break) (Henrik Lantz, Jacques Dainat, Martin Norling, Mahesh Panchal, Lucile Soler)

Note: The practical exercise sessions will be made on the UPPMAX cluster. »UPPMAX login instructions«